Yutaka Nakashimada

Last Updated :2017/11/08

Affiliations, Positions
Graduate School of Advanced Sciences of Matter, ., Professor
Web Site
E-mail
nyutakahiroshima-u.ac.jp

Basic Information

Major Professional Backgrounds

  • 1995/10, 2001/03, Hiroshima University, Department of Fermentation technology, Faculty of Engineering, Research Associate
  • 2001/04, 2006/09, Hiroshima University, Department of Molecular Biotechnology、 Graduate School of Advanced Sciences of Matter, Research Associate
  • 2006/10, 2008/09, Tokyo University of Agriculture and Technology, Department of Chemical Engineering、 Graduate School of Technology, Associate Professor
  • 2008/10, 2014/08, Hiroshima University, Department of Molecular Biotechnology、 Graduate School of Advanced Sciences of Matter, Associate Professor
  • 2014/09, Hiroshima University, Department of Molecular Biotechnology、 Graduate School of Advanced Sciences of Matter, Professor

Educational Backgrounds

  • Nagoya University, Graduate School, Division of Engineering, Chemical Engineering, Japan, 1993/04, 1995/09

Academic Degrees

  • Doctor of Engineering, Nagoya University
  • Master of Engineering, Nagoya University

Educational Activity

  • School of Engineering:Department of Chemistry, Biotechnology and Process Engineering, Graduate School of Advanced Sciences of Matter:Molecular Biotechnology, Graduate School of Advanced Sciences of Matter:Molecular Biotechnology

Research Fields

  • Engineering;Process / Chemical engineering;Biofunction / Bioprocess

Research Keywords

  • metabolic engineering
  • methane fermentation
  • low moisture content
  • organic wastes

Educational Activity

Course in Charge

  1. 2017, Undergraduate Education, Second Semester, Basic Experiments in Chemistry
  2. 2017, Undergraduate Education, First Semester, Training of Biotechnology I
  3. 2017, Undergraduate Education, First Semester, Fermentation Technology
  4. 2017, Undergraduate Education, Second Semester, Molecular Bioinformatics
  5. 2017, Undergraduate Education, 3Term, Advanced Biofuel Engineering
  6. 2017, Graduate Education (Master's Program) , Second Semester, Seminar on Molecular Biotechnology
  7. 2017, Graduate Education (Doctoral Program) , Academic Year, Advanced Study in Molecular BiotechnologyII
  8. 2017, Graduate Education (Master's Program) , First Semester, Introduction to Life Science
  9. 2017, Graduate Education (Master's Program) , First Semester, Seminar on Molecular Biotechnology
  10. 2017, Graduate Education (Master's Program) , 3Term, Environmental Biotechnology B
  11. 2017, Graduate Education (Master's Program) , Academic Year, Advanced Study in Molecular Biotechnology I
  12. 2017, Graduate Education (Master's Program) , Year, Advanced Study in Molecular Biotechnology I
  13. 2017, Graduate Education (Master's Program) , Academic Year, Advanced Study in Molecular Biotechnology I
  14. 2017, Graduate Education (Master's Program) , Academic Year, Advanced Study in Molecular Biotechnology I
  15. 2017, Graduate Education (Doctoral Program) , Academic Year, Advanced Study in Molecular BiotechnologyII
  16. 2017, Graduate Education (Doctoral Program) , Academic Year, Advanced Study in Molecular BiotechnologyII
  17. 2017, Graduate Education (Doctoral Program) , Year, Advanced Study in Molecular BiotechnologyII
  18. 2017, Graduate Education (Doctoral Program) , Academic Year, Advanced Study in Molecular BiotechnologyII
  19. 2017, Graduate Education (Doctoral Program) , Academic Year, Advanced Study in Molecular BiotechnologyII
  20. 2017, Graduate Education (Master's Program) , 3Term, Advanced Biofuel Engineering
  21. 2017, Graduate Education (Master's Program) , 3Term, Biomass Utilization

Research Activities

Academic Papers

  1. Homolactic Acid Fermentation by the Genetically Engineered Thermophilic Homoacetogen Moorella thermoacetica ATCC 39073, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 83(8), APR 2017
  2. Thermophilic ethanol fermentation from lignocellulose hydrolysate by genetically engineered Moorella thermoacetica, BIORESOURCE TECHNOLOGY, 245, 1393-1399, 2017
  3. Improved methanization and microbial diversity during batch mode cultivation with repetition of substrate addition using defined organic matter and marine sediment inoculum at seawater salinity, BIORESOURCE TECHNOLOGY, 245, 833-840, 2017
  4. In situ mass spectrometry of glucose decomposition under hydrothermal reactions, KOREAN JOURNAL OF CHEMICAL ENGINEERING, 34(5), 1524-1530, MAY 2017
  5. In-situ Mass Spectroscopic Analysis of Glucose Decomposition under Hydrothermal Condition: Quantitative Analysis for Reaction Kinetics, JOURNAL OF THE JAPAN PETROLEUM INSTITUTE, 60(2), 101-109, MAR 2017
  6. Identification and characterization of chemosensors for D-malate, unnatural enantiomer of malate, in Ralstonia pseudosolanacearum, MICROBIOLOGY-SGM, 163(2), 233-242, FEB 2017
  7. Identification of boric acid as a novel chemoattractant and elucidation of its chemoreceptor in Ralstonia pseudosolanacearum Ps29, SCIENTIFIC REPORTS, 7, AUG 17 2017
  8. Decomposition kinetics of uronic acids obtained from kelp under hydrothermal condition, JOURNAL OF THE ENERGY INSTITUTE, 90(2), 185-190, APR 2017
  9. Quantitative In Situ Mass Spectrometry Analysis of Mannitol Decomposition Products under Hydrothermal Conditions, ENERGY & FUELS, 31(10), 10866-10873, 2017
  10. Bacterial community structure and predicted alginate metabolic pathway in an alginate-degrading bacterial consortium, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, 121(3), 286-292, MAR 2016
  11. Glycerol acts as alternative electron sink during syngas fermentation by thermophilic anaerobe Moorella thermoacetica, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, 121(3), 268-273, MAR 2016
  12. Dry Co-Digestion of Poultry Manure with Agriculture Wastes, APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY, 178(5), 932-946, MAR 2016
  13. Kinetics of Sorbitol Decomposition under Hydrothermal Condition, JOURNAL OF THE JAPAN PETROLEUM INSTITUTE, 59(4), 149-154, JUL 2016
  14. Decomposition Kinetics of Mannose, Its Sugar Alcohol, and Its Uronic Acid under Hydrothermal Condition, JOURNAL OF CHEMICAL ENGINEERING OF JAPAN, 49(7), 663-667, JUL 2016
  15. Semi-continuous methane production from undiluted brown algae using a halophilic marine microbial community, BIORESOURCE TECHNOLOGY, 200, 616-623, JAN 2016
  16. High-rate Fermentation of Acetate to Methane under Saline Condition by Aceticlastic Methanogens Immobilized in Marine Sediment, JOURNAL OF THE JAPAN PETROLEUM INSTITUTE, 55, 9-15, FEB 2016
  17. Characterization of a halotolerant acetoclastic methanogen highly enriched from marine sediment and its application in removal of acetate, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, 121(2), 196-202, FEB 2016
  18. Isolation and characterization of bacterium producing lipid from short-chain fatty acids, BIORESOURCE TECHNOLOGY, 201, 215-221, FEB 2016
  19. Decomposition Kinetics of Mannose, Its Sugar Alcohol, and Its Uronic Acid under Hydrothermal Condition, Journal of Chemical Engineering of Japan, 49(7), 663-667, 2016
  20. Efficient aspartic acid production by a psychrophile-based simple biocatalyst, Journal of Industrial Microbiology & Biotechnology, 42(10), 1319-1324, OCT 2015
  21. Dysgonomonas alginatilytica sp nov., an alginate-degrading bacterium isolated from a microbial consortium, INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 65, 3570-3575, OCT 2015
  22. Identification of the mcpA and mcpM Genes, Encoding Methyl-Accepting Proteins Involved in Amino Acid and L-Malate Chemotaxis, and Involvement of McpM-Mediated Chemotaxis in Plant Infection by Ralstonia pseudosolanacearum (Formerly Ralstonia solanacearum P, Applied and Environmental Microbiology, 81(21), 7420-7430, NOV 2015
  23. Improved methane production from brown algae under high salinity by fed-batch acclimation, Bioresource Technology, 187, 275-281, JUL 2015
  24. Determination of Mannitol Decomposition Rate under Hydrothermal Pretreatment Condition, Journal of the Japan Petroleum Institute, 58(4), 252-255, JUL 2015
  25. Effect of Salinity on Methanogenic Propionate Degradation by Acclimated Marine Sediment-Derived Culture, APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY, 177(7), 1541-1552, DEC 2015
  26. Supercritical gasification of ethanol fermentation residue of seaweed: effect of sodium chloride salt, International Journal of Nano and Biomaterials, 5(1), 3-13, 2014.06.01
  27. Identification of Pseudomonas fluorescens Chemotaxis Sensory Proteins for Malate, Succinate, and Fumarate, and Their Involvement in Root Colonization, Microbes and Environments, 29(4), 413-419, 2014, 12, 20
  28. Production of 16.5% v/v ethanol from seagrass seeds, Journal of Bioscience and Bioengineering, 118(6), 646-650, 2014, 12, 20
  29. Evaluation of marine sediments as microbial sources for methane production from brown algae under high salinity, Bioresource Technology, 169, 362-366, 2014, 10, 20
  30. Enhancement of methane production from co-digestion of chicken manure with agricultural wastes, Bioresource Technology, 159, 80-87, 2014, 05, 20
  31. Behavior of Organics in Kelp during Hydrothermal Pretreatment: Fundamental Characteristics and Effect of Salt, Journal of The Fuel Society of Japan, 93(5), 531-535, 2014, 05, 20
  32. Enhancement of (R)-1,3-butanediol production by engineered Escherichia coli using a bioreactor system with strict regulation of overall oxygen transfer coefficient and pH, Bioscience Biotechnology and Biochemistry, 78(4), 695-700, 2014, 04, 20
  33. Degradation of chloroanilines by toluene dioxygenase from Pseudomonas putida T57, Journal of Bioscience and Bioengineering, 117(3), 292-297, 2014, 03, 20
  34. Genome-guided analysis of transformation efficiency and carbon dioxide assimilation by Moorella thermoacetica Y72, Gene, 535(2), 150-155, 2014, 02, 20
  35. Value-added lipid production from brown seaweed biomass by two-stage fermentation using acetic acid bacterium and thraustochytrid, Applied Microbiology and Biotechnology, 98, 9207-9216
  36. Engineering of a functional thermostable kanamycin resistance marker for use in Moorella thermoacetica ATCC39073, Fems Microbiology Letters, 343(1), 8-12, 2013, 10, 20
  37. Development of genetic transformation and heterologous expression system in carboxydotrophic thermophilic acetogen Moorella thermoacetica, Journal of Bioscience and Bioengineering, 115(4), 347-352, 2013, 04, 20
  38. Improvement of (R)-1,3-butanediol production by engineered Escherichia coli, Journal of Bioscience and Bioengineering, 115(5), 475-480, 2013, 03, 20
  39. Isolation of Thermophilic Acetogens and Transformation of Them with the pyrF and kan(r) Genes, Bioscience Biotechnology and Biochemistry, 77(2), 301-306, 2013, 02, 20
  40. Construction of a simple biocatalyst using psychrophilic bacterial cells and its application for efficient 3-hydroxypropionaldehyde production from glycerol, AMB Express, 3, 2013
  41. Identification of Chemotaxis Sensory Proteins for Amino Acids in Pseudomonas fluorescens Pf0-1 and Their Involvement in Chemotaxis to Tomato Root Exudate and Root Colonization, Microbes and Environments, 27(4), 462-469, 2012, 12, 20
  42. Evaluation of anaerobic biodegradability of forage rice straw fertilized with livestock waste, Water Science and Technology, 66(2), 438-444, 2012, 12, 20
  43. Ethanol production from brown algae with alginate-degrading microbial consortia, Proceedings of 19th Regional Symposium of Chemical Engineering, -(-), A-02-1-4, 2012, 11, 20
  44. Isolation and characterization of tetrahydrofuran-degrading Rhodococcus aetherivorans strain M8, Process Biochemistry, 47(11), 1665-1669, 2012, 11, 20
  45. Understanding of microbial diversity required for efficient methane production from marine biomass resources, Proceedings of The 9th Asia-Pacific Marine Biotechnology Conference, -(-), 14S1-2, 2012, 06, 20
  46. Thermophilic Anaerobic Digestion Characteristics of Forage Rice, Environmental Science, 24(5), 462-471, 2011, 09, 20
  47. Pathway of 17 beta-estradiol degradation by Nitrosomonas europaea and reduction in 17 beta-estradiol-derived estrogenic activity, Environmental Chemistry Letters, 9(1), 1-6, 2011, 03, 20
  48. Thermophilic two-stage dry anaerobic digestion of model garbage with ammonia stripping, Journal of Bioscience and Bioengineering, 111(3), 312-319, 2011, 03, 20
  49. Brewer's yeast cell wall affects microbiota composition and decreases Bacteroides fragilis populations in an anaerobic gut intestinal model, Journal of Bioscience and Bioengineering, 111(2), 178-184, 2011, 02, 20
  50. Direct and Indirect Greenhouse Gas Emissions from Vertical Flow Constructed Wetland Planted with Forage Rice, Kagaku Kogaku Ronbunshu, 36(4), 229-236, 2010, 12, 20
  51. Improved methane fermentation of chicken manure via ammonia removal by biogas recycle, Bioresource Technology, 101(16), 6368-6373, 2010, 08, 20
  52. Mechanism of Degradation of Ethyl t-Butyl Ether by Sodium Persulfate, Japan Journal of Water Pollution Research, 32(10), 543-547, 2009, 10, 20
  53. Dry anaerobic ammonia-methane production from chicken manure, Applied Microbiology and Biotechnology, 82(4), 757-764, 2009, 03, 20
  54. Dry mesophilic fermentation of chicken manure for production of methane by repeated batch culture, Journal of Bioscience and Bioengineering, 107(3), 293-295, 2009, 03, 20
  55. Nitrogen transformations in vertical flow systems with and without rice (Oryza sativa) studied with a high-resolution soil-water profiler, Ecological Engineering, 35(2), 213-220, 2009, 02, 20
  56. Degradation of Perfluorooctansulfonate (PFOS) and Perfluorooctanoic Acid (PFOA) by Mechanochemical Treatment, Chemical Engineering, 34(5), 539-544, 2008, 09, 20
  57. Ammonia-methane two-stage anaerobic digestion of dehydrated waste-activated sludge, Applied Microbiology and Biotechnology, 79(6), 1061-1069, 2008, 07, 20
  58. Degradation of glyoxylate and glycolate with ATP synthesis by a thermophilic anaerobic bacterium, Moorella sp strain HUC22-1, Applied and Environmental Microbiology, 74(5), 1447-1452, 2008, 03, 20
  59. Characterization of enzymes involved in the ethanol production of Moorella sp HUC22-1, Archives of Microbiology, 188(1), 37-45, 2007, 07, 20
  60. Recent development of anaerobic digestion processes for energy recovery from wastes, Journal of Bioscience and Bioengineering, 103(2), 105-112, 2007, 02, 20
  61. Desulfotomaculum carboxydivorans sp. nov., a novel sulfate-reducing bacterium capable of growth at 100 % CO, International Journal of Systematic and Evolutionary Microbiology, 55(5), 2159-2165, 2005, 09, 20
  62. H2 and ethanol production from glycerol-containing wastes discharged from biodiesel manufacturing process., Journal of Bioscience and Bioengineering, 100(3), 260-265, 2005, 09, 20
  63. Hydrogen and ethanol production from glycerol-containing wastes discharged after biodiesel manufacturing process, Journal of Bioscience and Bioengineering, 100(3), 260-265, 2005, 09, 20
  64. Isolation of higher astaxanthin producing mutants of Phaffia rhodozyma by cell sorting monitoring elevated cellular redox potentials upon heat shock treatment, The 14th International Symposium On Carotenoids (Iupac) Edinburgh, Uk, 2005, 75, 2005, 07, 20
  65. Acetate and ethanol production from H-2 and CO2 by Moorella sp using a repeated batch culture, Journal of Bioscience and Bioengineering, 99(3), 252-258, 2005, 03, 20
  66. Ethanol production from H2 and CO2 by a newly isolated thermophilic bacterium, Moorella sp HUC22-1, Biotechnology Letters, 26(20), 1607-1612, 2004, 10, 20
  67. High-yield production of hydrogen by Enterobacter aerogenes mutants with decreased alpha-acetolactate synthase activity, Journal of Bioscience and Bioengineering, 97(4), 227-232, 2004, 04, 20
  68. Metabolic analysis of acetate accumulation, during xylose consumption by Paenibacillus polymyxa, Applied Microbiology and Biotechnology, 64(1), 112-119, 2004, 03, 20
  69. High rate production of hydrogen/methane from various substrates and wastes, Recent Progress of Biochemical and Biomedical Engineering In Japan I, 90, 63-87, 2004, 01, 20
  70. Heterologous Protein Expression in a Halophilic Green Alga Dunaliella bardawil, 6th International Marine Biotechnology Conference/5th Asia-Pacific Marine Biotechnology Conference, 2003, 2003, 09, 20
  71. Treatment of the waste from the process of soy sauce brewing and its useful application, Bioscience & Industry, 60(12), 807-812, 2002, 12, 20
  72. Hydrogen production of Enterobacter aerogenes altered by extracellular and intracellular redox states, International Journal of Hydrogen Energy, 27(11-12), 1399-1405, 2002, 12, 20
  73. H2 production of Enterobacter aerogenes altered by extracellular and intracellular redox states, International Journal of Hydrogen Energy, 27(11/12), 1399-1405, 2002, 11, 20
  74. Alternative transformation method for a unicellular green alga Chlamydomonas reinharditii by polyamidoamine dendrimers, Proceedings of 9th International Symposium On The Genetics of Industrial Microorganisms, 137, 2002, 04, 20
  75. Genetic transformation of reporter genes for astaxanthin-producing unicellular green alga Haematococcus pluvialis by electropolation., 9th International Symposium On The Genetics of Industrial Microorganisms, Gyeongju, Korea, 137, 2002, 04, 20
  76. Hydrogen-methane two-stage process for anaerobic wastewater treatment, Proceedings of International Conference On Tropical Bio-Resources and Green Chemistry Strategy, 326-331, 2002, 04, 20
  77. Biological and chemical treatment of solid waste from soy sauce manufacture, Water Science and Technology, 45(12), 335-338, 2002, 01, 20
  78. Enhancement of (R,R)-2,3-butanediol production from xylose by Paenibacillus polymyxa at elevated temperatures, Biotechnology Letters, 24(2), 109-114, 2002, 01, 20
  79. Bio-Hydrogen Production, Jsps Biotechnology Joint Seminar Proceedings, 2001, 12, 20
  80. Methane fermentation of coastal mud sediment by a two-stage upflow anaerobic sludge blanket (UASB) reactor system., Applied Microbiology and Biotechnology, 56(1/2), 280-285, 2001, 07, 20
  81. Methane fermentation of coastal mud sediment by a two-stage upflow anaerobic sludge blanket (UASB) reactor system, Applied Microbiology and Biotechnology, 56(1-2), 280-285, 2001, 07, 20
  82. Asymmetric reduction of ethyl acetoacetate to ethyl (R)-3-hydroxybutyrate coupled with nitrate reduction by Paracoccus denitrificans., Journal of Bioscience and Bioengineering, 91(4), 368-372, 2001, 04, 20
  83. Efficient production of cellulolytic and xylanolytic enzymes by the rumen anaerobic fungus, Neocallimastix frontalis, in a repeated batch culture, Journal of Bioscience and Bioengineering, 91(2), 153-158, 2001, 02, 20
  84. Enhanced 2,3-butanediol production by addition of acetic acid in Paenibacillus polymyxa, Journal of Bioscience and Bioengineering, 90(6), 661-664, 2000, 12, 20
  85. Development of denitrification system using immobilized chemoautotrophic bacterium, Thiobacillus denitrificans., The Proceedings of Fifth International Symposium On Environmental Biotechnology, P1-11, 2000, 07, 20
  86. Methane fermentation of cellulose powder, sea sediment mud and soybean solid waste., The Proceedings of Fifth International Symposium On Environmental Biotechnology, O6-3, 2000, 07, 20
  87. Methane fermentation of coastal mud sediment., The Proceedings of Fifth International Symposium On Environmental Biotechnology, P5-5, 2000, 07, 20
  88. Degradation of Excess Activated Sludge by Thermophilic Bacteria, International Symposium of Environmental Biotechnology, 182, 2000, 04, 20
  89. Genetic transformation of a halophilic green alga Dunaliella bardawil with some reporter genes, The 4th Asia-Pacific Conference On Algal Biotechnology, Hong Kong Convention and Exhibition Centre, 86, 2000, 04, 20
  90. Direct conversion of cellulose to methane by anaerobic fungus Neocallimastix frontalis and defined methanogens, Biotechnology Letters, 22(3), 223-227, 2000, 02, 20
  91. Methane production from cellulose by co-culture of anaerobic fungus Neocallimastix frontalis and methanogens., Proceeding of Asia-Pacific Biochemical Engineering Conference ’97, Beijing, RPC, P-ENV19, 1999, 11, 19
  92. Flocculating Property of Extracellular Polymeric Substance Derived from a Marine Photosynthetic Bacterium, Rhodovulum sp., Journal of Bioscience and Bioengineering, 87(5), 625-629, 1999, 05, 19
  93. Massive astaxanthin production by a green alga Haematococcus pluvialis NIES-144 in acetate-feeding photobioreactor., The Second Asian Pacific Phycological Forum, The Chinese University of Hong Kong (1999), 1999, 04, 19
  94. Removal of organic matters from wastewater using photostnthetic bacterial flocs or artificial UASB granules, Biotechnology For Sustainable Utilization of Biological Resources In The Tropics, 13, 115-122, 1999, 04, 19
  95. Inhibitory effect of acetic acid on growth of hyperthermophilic archaeon pyrococcus furiosus., Journal of Bioscience and Bioengineering, 87(2), 149-154, 1999, 02, 19
  96. Growth and flocculation of a marine photosynthetic bacterium Rhodovulum sp., Appl. Microbiol. Biotechnol., 50(6), 682-691, 1998, 12, 19
  97. High density cell culture of a marine photosynthetic bacterium Rhodovulum sp. with self-flocculated cells., Biotechnology Letters, 20(12), 1113-1117, 1998, 12, 19
  98. Optimization of dilution rate, pH and oxygen supply on optical purity of 2, 3-butanediol produced by Paenibacillus polymyxa in chemostat culture., Biotechnology Letters, 20(12), 1133-1138, 1998, 12, 19
  99. Promotion of growth and flocculation of a marine photosynthetic bacterium, Rhodovulum sp. by metal cations., Biotechnology Letters, 20(12), 1109-1112, 1998, 12, 19
  100. Hydrogen production with high yield and high evolution rate by self-flocculated cells of Enterobacter aerogenes in a packed-bed reactor., Applied Microbiology and Biotechnology, 49(4), 450-454, 1998, 04, 19
  101. Kinetics and energetics of Acetobacterium sp. in chemostat culture on methanol-CO2, Journal of Fermentation and Bioengineering, 85(2), 223-229, 1998, 02, 19
  102. Astaxanthin production by Phaffia rhodozyma enhanced in fed-batch culture with glucose and ethanol feeding., Biotechnology Letters, 19(11), 1109-1111, 1997, 11, 19
  103. Influence of oxygen and glucose on primary metabolism and astaxanthin production by Phaffia rhodozyma in batch and fed-batch cultures: kinetic and stoichiomeric analysis, Appl. Environ. Microbiol., 63(11), 4471-4478, 1997, 11, 19
  104. Hydrogen production with high yield and high growth rate by Enterobacter aerogenes., 1323-1326, 1997, 10, 19
  105. pH Auxostat continuous culture of Acetobacterium sp. coupled with removal of acetate by Methanosaeta concilli, Biotechnol. Lett., 19(10), 989-993, 1997, 10, 19
  106. Enhanced hydrogen production in altered mixed acid fermentation of glucose by Enterobacter aerogenes, J. Ferment. Bioeng., 83, 358-363, 1997, 04, 19
  107. Efficient Regeneration from GUS-Transformed Ajuga Hairy Root, Journal of Fermentation and Bioengineering, 81(5), 374-378, 1996, 05, 19
  108. Efficient Culture Method for Production of Plantlets from Mechanically Cut Horseradish Hairy Roots., Journal of Fermentation and Bioengineering, 81(1), 87-89, 1996, 01, 19
  109. Production of plantlets for use as Artificial Seeds from Horseradish Hairy Roots Fragmented in a Blender., Journal of Fermentation and Bioengineering, 79(5), 458-464, 1995, 05, 19
  110. Stimulation of Emergence of Root Apical Meristems in Horseradish Hairy Root by Auxin Supplementation and Its Kinetic Model., Journal of Fermentation and Bioengineering, 77(2), 178-182, 1994, 02, 19
  111. Comparison of acetate inhibition on growth of host and recombinant E. coli K12 strains., Biotechnology Letters, 14(12), 1115-1118, 1992, 12, 19
  112. Production of artificial seed from horseradish hairy root., Journal of Fermentation and Bioengineering, 74(1), 21-26, 1992, 07, 19
  113. Excretion of Peroxidase from horseradish hairy root in combination with ion supplementation., Applied Microbiology and Biotechnology, 37(5), 560-565, 1992, 05, 19

Publications such as books

  1. 2017/01, Applied Bioengineering- Innovations and Future Directions (Edited by Toshiomi Yoshida), Energy Recovery from Organic Waste, John Wiley & Sons, 2017, 2017, English, Yutaka Nakashimada, Naomichi Nishio, 978-3-527-34075-0, 656, 545-573
  2. 2015/04, Membrane Reactors for Energy Applications and Basic Chemical Production, Membrane reactors for biogas production and processing, 2015, 04, Manabu Miyamoto, Shigeyuki Uemiya, Yutaka Nakashimada, 9781782422273, 696, 345-366
  3. 2014/03, Microbial Production-From Genome Design to Cell Engineering , Production of biofuels and useful materials by anaerobic organisms in ecosystem of methane fermentation, 2014, 03, Y. Nakashimada, N. Nishio, 9784431546061, 306, 283-300
  4. 2013/02, Food Industry Wastes  1st Edition - Assessment and Recuperation of Commodities, Hydrogen generation from food industry and biodiesel wastes, Manufacture of biogas and fertilizer from solid food wastes by means of anaerobic digestion, 2013, 02, Y. Nakashimada, N. Nishio, 9780123919212, 338, 121-133, 157-170
  5. 2015/01, Handbook of Marine Biotechnology, Biofuel innovation by microbial diversity, 2013, 02, Thiago Bruce, Astria D. Ferrao-Gonzales, Yutaka Nakashimada, Yuta Matsumura, Fabiano Thompson, Tomoo Sawabe, 9783642539701, 1512, 1163-1180
  6. 2004/06, High rate production of hydrogen/methane from various substrates and wastes. , Advanced in Biochemical Engineering/Biotechnology, 2004, 06, Y. Nakashimada, N. Nishio, 24

Invited Lecture, Oral Presentation, Poster Presentation

  1. Future perspective of Biomass toward Sustainable Society, Yutaka Nakashimada, International Workshop on Biomass for Biofuels 2017, 2017/10/19, With Invitation, Research Center for Chemistry, Indonesian Institute of Science and Indonesian Research Institute for Biotechnology and Bioindustry, Serpong, Indonesia
  2. Integrated process development for biorefinery of seaweed, Y. Nakashimada, T. Aki, Y. Okamura, Y. Matsumura, N. Nakamura, The 11th Asia-Pacific Marine Biotechnology Conference 2017, 2017/05/24, With Invitation, The Asia Pacific Society of Marine Biotechnology, Hawaii, USA
  3. Fermentation technology to recover energy and high-value added products from seaweed, Yutaka Nakashimada, 4th International Conference on Bioprocess and Biosystem Engineering, 2016/10/21, With Invitation, Conference Series LLC, Houston, USA
  4. Process development of anaerobic digestion for energy and material production from land and marine biomass, Yutaka Nakashimada, The Society for Biotechnology, Japan/Annual Meeting 2015, 2015/10/27, With Invitation, The Society for Biotechnology, Japan, Kagoshima, Japan
  5. Anaerobic fermentation of unconventional substrates for recovery of energy and useful materials, Y. Nakashimada, N. Nishio, Asia BioHydrogen & BioEnergy 2013, 2013/12/24, With Invitation, Asia Biohylinks, Osaka City University
  6. Biomass refinery via biological gasification and conversion of various feedstocks, Y. Nakashimada, 2nd Joint Conference in Renewable Energy and Nanotechnology (JCREN2013), 2013/11/25, With Invitation, Higashi-Hiroshima, Japan.
  7. Production of biofuels and useful materials by anaerobic organisms, Y. Nakashimada, Japanese and Chinese Scholars Symposium on Low-Carbon and Biomass Conversion, 2013/11/04, With Invitation, Huaian City, China
  8. Understanding of microbial diversity required for efficient methane production from marine biomass resources, Y. Nakashimada, N. Nishio, The 9th Asia-Pacific Marine Biotechnology Conference, 2012/07/15, With Invitation, Kochi, Japan